The mitochondrial genomes of Atlas Geckos (Quedenfeldtia): mitogenome assembly from transcriptomes and anchored hybrid enrichment datasets
Identifieur interne : 000767 ( Main/Exploration ); précédent : 000766; suivant : 000768The mitochondrial genomes of Atlas Geckos (Quedenfeldtia): mitogenome assembly from transcriptomes and anchored hybrid enrichment datasets
Auteurs : Mariana L. Lyra [Brésil] ; Ulrich Joger [Allemagne] ; Ulrich Schulte [Allemagne] ; Tahar Slimani [Maroc] ; El Hassan El Mouden [Maroc] ; Abdellah Bouazza [Maroc] ; Sven Künzel [Allemagne] ; Alan R. Lemmon [États-Unis] ; Emily Moriarty Lemmon [États-Unis] ; Miguel Vences [Allemagne]Source :
- Mitochondrial DNA. Part B, Resources [ 2380-2359 ] ; ????.
Abstract
The nearly complete mitogenomes of the two species of North African Atlas geckos,
Url:
DOI: 10.1080/23802359.2017.1339212
PubMed: 33473826
PubMed Central: 7800026
Affiliations:
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Lyra</name><affiliation wicri:level="1"><nlm:aff id="AF0001"><institution>Departamento de Zoologia, Instituto de Biociências, UNESP – Universidade Estadual Paulista</institution>,<city>Rio Claro</city>,<country>Brazil</country>;</nlm:aff><country xml:lang="fr">Brésil</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Joger, Ulrich" sort="Joger, Ulrich" uniqKey="Joger U" first="Ulrich" last="Joger">Ulrich Joger</name><affiliation wicri:level="1"><nlm:aff id="AF0002"><institution>Staatliches Naturhistorisches Museum</institution>,<city>Braunschweig</city>,<country>Germany</country>;</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Schulte, Ulrich" sort="Schulte, Ulrich" uniqKey="Schulte U" first="Ulrich" last="Schulte">Ulrich Schulte</name><affiliation wicri:level="1"><nlm:aff id="AF0003"><institution>Büro für Faunistische Gutachten</institution>,<city>Borgholzhausen</city>,<country>Germany</country>;</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Slimani, Tahar" sort="Slimani, Tahar" uniqKey="Slimani T" first="Tahar" last="Slimani">Tahar Slimani</name><affiliation wicri:level="1"><nlm:aff id="AF0004"><institution>Faculty of Sciences, Biodiversity and Ecosystem Dynamics Laboratory, Cadi Ayyad University</institution>,<city>Marrakech</city>,<country>Morocco</country>;</nlm:aff><country xml:lang="fr">Maroc</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="El Mouden, El Hassan" sort="El Mouden, El Hassan" uniqKey="El Mouden E" first="El Hassan" last="El Mouden">El Hassan El Mouden</name><affiliation wicri:level="1"><nlm:aff id="AF0004"><institution>Faculty of Sciences, Biodiversity and Ecosystem Dynamics Laboratory, Cadi Ayyad University</institution>,<city>Marrakech</city>,<country>Morocco</country>;</nlm:aff><country xml:lang="fr">Maroc</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Bouazza, Abdellah" sort="Bouazza, Abdellah" uniqKey="Bouazza A" first="Abdellah" last="Bouazza">Abdellah Bouazza</name><affiliation wicri:level="1"><nlm:aff id="AF0004"><institution>Faculty of Sciences, Biodiversity and Ecosystem Dynamics Laboratory, Cadi Ayyad University</institution>,<city>Marrakech</city>,<country>Morocco</country>;</nlm:aff><country xml:lang="fr">Maroc</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Kunzel, Sven" sort="Kunzel, Sven" uniqKey="Kunzel S" first="Sven" last="Künzel">Sven Künzel</name><affiliation wicri:level="1"><nlm:aff id="AF0005"><institution>Max Planck Institute for Evolutionary Biology</institution>,<city>Plön</city>,<country>Germany</country>;</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Lemmon, Alan R" sort="Lemmon, Alan R" uniqKey="Lemmon A" first="Alan R." last="Lemmon">Alan R. Lemmon</name><affiliation wicri:level="1"><nlm:aff id="AF0006"><institution>Department of Scientific Computing, Florida State University, Dirac Science Library</institution>,<city>Tallahassee</city>,<state>FL</state>,<country>USA</country>;</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Lemmon, Emily Moriarty" sort="Lemmon, Emily Moriarty" uniqKey="Lemmon E" first="Emily Moriarty" last="Lemmon">Emily Moriarty Lemmon</name><affiliation wicri:level="1"><nlm:aff id="AF0007"><institution>Department of Biological Science, Florida State University</institution>,<city>Tallahassee</city>,<state>FL</state>,<country>USA</country>;</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Vences, Miguel" sort="Vences, Miguel" uniqKey="Vences M" first="Miguel" last="Vences">Miguel Vences</name><affiliation wicri:level="1"><nlm:aff id="AF0008"><institution>Zoological Institute, Technical University of Braunschweig</institution>,<city>Braunschweig</city>,<country>Germany</country></nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author></analytic><series><title level="j">Mitochondrial DNA. Part B, Resources</title><idno type="eISSN">2380-2359</idno><imprint><date when="????">????</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><title>Abstract</title><p>The nearly complete mitogenomes of the two species of North African Atlas geckos, <italic>Quedenfeldtia moerens</italic> and <italic>Q. trachyblepharus</italic> were assembled from anchored hybrid enrichment data and RNAseq data. Congruent assemblies were obtained for four samples included in both datasets. We recovered the 13 protein-coding genes, 22 tRNA genes, and two rRNA genes for both species, including partial control region. The order of genes agrees with that of other geckos.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Arnold, En" uniqKey="Arnold E">EN. Arnold</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Barata, M" uniqKey="Barata M">M Barata</name></author><author><name sortKey="Perera, A" uniqKey="Perera A">A Perera</name></author><author><name sortKey="Martinez Freiria, F" uniqKey="Martinez Freiria F">F Martínez-Freiría</name></author><author><name sortKey="Harris, Dj" uniqKey="Harris D">DJ. Harris</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bernt, M" uniqKey="Bernt M">M Bernt</name></author><author><name sortKey="Donath, A" uniqKey="Donath A">A Donath</name></author><author><name sortKey="Juhling, F" uniqKey="Juhling F">F Jühling</name></author><author><name sortKey="Externbrink, F" uniqKey="Externbrink F">F Externbrink</name></author><author><name sortKey="Florentz, C" uniqKey="Florentz C">C Florentz</name></author><author><name sortKey="Fritzsch, G" uniqKey="Fritzsch G">G Fritzsch</name></author><author><name sortKey="Putzh, J" uniqKey="Putzh J">J Pützh</name></author><author><name sortKey="Middendorf, M" uniqKey="Middendorf M">M Middendorf</name></author><author><name sortKey="Stadler, Pf" uniqKey="Stadler P">PF. Stadler</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Chevreux, B" uniqKey="Chevreux B">B Chevreux</name></author><author><name sortKey="Wetter, T" uniqKey="Wetter T">T Wetter</name></author><author><name sortKey="Suhai, S" uniqKey="Suhai S">S. Suhai</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Gamble, T" uniqKey="Gamble T">T Gamble</name></author><author><name sortKey="Bauer, Am" uniqKey="Bauer A">AM Bauer</name></author><author><name sortKey="Colli, Gr" uniqKey="Colli G">GR Colli</name></author><author><name sortKey="Greenbaum, E" uniqKey="Greenbaum E">E Greenbaum</name></author><author><name sortKey="Jackman, Tr" uniqKey="Jackman T">TR Jackman</name></author><author><name sortKey="Vitt, Lj" uniqKey="Vitt L">LJ Vitt</name></author><author><name sortKey="Simons, Am" uniqKey="Simons A">AM. Simons</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Gamble, T" uniqKey="Gamble T">T Gamble</name></author><author><name sortKey="Bauer, Am" uniqKey="Bauer A">AM Bauer</name></author><author><name sortKey="Greenbaum, E" uniqKey="Greenbaum E">E Greenbaum</name></author><author><name sortKey="Jackman, Tr" uniqKey="Jackman T">TR. Jackman</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Gamble, T" uniqKey="Gamble T">T Gamble</name></author><author><name sortKey="Greenbaum, E" uniqKey="Greenbaum E">E Greenbaum</name></author><author><name sortKey="Jackman, Tr" uniqKey="Jackman T">TR Jackman</name></author><author><name sortKey="Russell, Ap" uniqKey="Russell A">AP Russell</name></author><author><name sortKey="Bauer, Am" uniqKey="Bauer A">AM. Bauer</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hahn, C" uniqKey="Hahn C">C Hahn</name></author><author><name sortKey="Bachmann, L" uniqKey="Bachmann L">L Bachmann</name></author><author><name sortKey="Chevreux, B" uniqKey="Chevreux B">B. Chevreux</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Katoh, K" uniqKey="Katoh K">K Katoh</name></author><author><name sortKey="Standley, Dm" uniqKey="Standley D">DM. Standley</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Lemmon, Ar" uniqKey="Lemmon A">AR Lemmon</name></author><author><name sortKey="Emme, Sa" uniqKey="Emme S">SA Emme</name></author><author><name sortKey="Lemmon, Em" uniqKey="Lemmon E">EM. Lemmon</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Lowe, Tm" uniqKey="Lowe T">TM Lowe</name></author><author><name sortKey="Chan, Pp" uniqKey="Chan P">PP. Chan</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Meyer, M" uniqKey="Meyer M">M Meyer</name></author><author><name sortKey="Kircher, M" uniqKey="Kircher M">M. Kircher</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Miller, Ma" uniqKey="Miller M">MA Miller</name></author><author><name sortKey="Pfeiffer, W" uniqKey="Pfeiffer W">W Pfeiffer</name></author><author><name sortKey="Schwartz, T" uniqKey="Schwartz T">T. Schwartz</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Prum, Ro" uniqKey="Prum R">RO Prum</name></author><author><name sortKey="Berv, Js" uniqKey="Berv J">JS Berv</name></author><author><name sortKey="Dornburg, A" uniqKey="Dornburg A">A Dornburg</name></author><author><name sortKey="Field, Dj" uniqKey="Field D">DJ Field</name></author><author><name sortKey="Townsend, Jp" uniqKey="Townsend J">JP Townsend</name></author><author><name sortKey="Lemmon, Ec" uniqKey="Lemmon E">EC Lemmon</name></author><author><name sortKey="Lemmon, Ar" uniqKey="Lemmon A">AR. Lemmon</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Pyron, Ra" uniqKey="Pyron R">RA Pyron</name></author><author><name sortKey="Burbrink, Ft" uniqKey="Burbrink F">FT Burbrink</name></author><author><name sortKey="Wiens, Jj" uniqKey="Wiens J">JJ. Wiens</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ruane, S" uniqKey="Ruane S">S Ruane</name></author><author><name sortKey="Raxworthy, Cj" uniqKey="Raxworthy C">CJ Raxworthy</name></author><author><name sortKey="Lemmon, Ar" uniqKey="Lemmon A">AR Lemmon</name></author><author><name sortKey="Lemmon, Ec" uniqKey="Lemmon E">EC Lemmon</name></author><author><name sortKey="Burbrink, Ft" uniqKey="Burbrink F">FT. Burbrink</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Stamatakis, A" uniqKey="Stamatakis A">A. Stamatakis</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Tucker, Db" uniqKey="Tucker D">DB Tucker</name></author><author><name sortKey="Colli, Gr" uniqKey="Colli G">GR Colli</name></author><author><name sortKey="Giugliano, Lg" uniqKey="Giugliano L">LG Giugliano</name></author><author><name sortKey="Hedges, Sb" uniqKey="Hedges S">SB Hedges</name></author><author><name sortKey="Hendry, Cr" uniqKey="Hendry C">CR Hendry</name></author><author><name sortKey="Moriarty Lemmon, E" uniqKey="Moriarty Lemmon E">E Moriarty Lemmon</name></author><author><name sortKey="Lemmon, Ar" uniqKey="Lemmon A">AR Lemmon</name></author><author><name sortKey="Sites, Jw" uniqKey="Sites J">JW Sites</name></author><author><name sortKey="Pyron, Ra" uniqKey="Pyron R">RA. Pyron</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Allemagne</li><li>Brésil</li><li>Maroc</li><li>États-Unis</li></country></list><tree><country name="Brésil"><noRegion><name sortKey="Lyra, Mariana L" sort="Lyra, Mariana L" uniqKey="Lyra M" first="Mariana L." last="Lyra">Mariana L. Lyra</name></noRegion></country><country name="Allemagne"><noRegion><name sortKey="Joger, Ulrich" sort="Joger, Ulrich" uniqKey="Joger U" first="Ulrich" last="Joger">Ulrich Joger</name></noRegion><name sortKey="Kunzel, Sven" sort="Kunzel, Sven" uniqKey="Kunzel S" first="Sven" last="Künzel">Sven Künzel</name><name sortKey="Schulte, Ulrich" sort="Schulte, Ulrich" uniqKey="Schulte U" first="Ulrich" last="Schulte">Ulrich Schulte</name><name sortKey="Vences, Miguel" sort="Vences, Miguel" uniqKey="Vences M" first="Miguel" last="Vences">Miguel Vences</name></country><country name="Maroc"><noRegion><name sortKey="Slimani, Tahar" sort="Slimani, Tahar" uniqKey="Slimani T" first="Tahar" last="Slimani">Tahar Slimani</name></noRegion><name sortKey="Bouazza, Abdellah" sort="Bouazza, Abdellah" uniqKey="Bouazza A" first="Abdellah" last="Bouazza">Abdellah Bouazza</name><name sortKey="El Mouden, El Hassan" sort="El Mouden, El Hassan" uniqKey="El Mouden E" first="El Hassan" last="El Mouden">El Hassan El Mouden</name></country><country name="États-Unis"><noRegion><name sortKey="Lemmon, Alan R" sort="Lemmon, Alan R" uniqKey="Lemmon A" first="Alan R." last="Lemmon">Alan R. Lemmon</name></noRegion><name sortKey="Lemmon, Emily Moriarty" sort="Lemmon, Emily Moriarty" uniqKey="Lemmon E" first="Emily Moriarty" last="Lemmon">Emily Moriarty Lemmon</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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